Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903640.1_cds_XP_016453729.1_47827
CDS Infomation

[gene=LOC107778062] [db_xref=GeneID:107778062] [protein=glycerophosphodiester phosphodiesterase GDPDL3-like] [protein_id=XP_016453729.1] [location=join(55112..55220,55887..56180,57087..57202,57389..57890,58300..58338,59813..60097,60911..61053,62063..62540,62816..63108)] [gbkey=CDS]
Sequence

ATGTGGAACCTCCGTTCTATTTCGTGCCTCCTGCTCCTTTGCTGCTCAGCTGCATTTGTT
TCTGCTCAAAGATCTAACAATGCTACCTCTAAATGGTTTACATTGAGCGGAGATGCACCG
AAAGTCATAGCTCGTGGCGGATTTTCTGGGTTAATGCCTGATTCAAGCTTTAATGCTTAT
ACTTTGGCAAGCACGATCAGCGTCGCCGATTGGGTTGCTTGGTGTGATGTTCAACTCACG
AAAGATGGGGTTGGCATTTGTTTATCTGATATCAGGCTCGACAATTCTTCTGACGTTGAT
GTTCTCTTCAAAAACAAGCAGAATACCTACTTGGTAAATGGTGTTCCTCAGAAAGGATGG
TTTTCTGTAGATTTCAATTTCAAGGATTTGGCACTTGTCACCTTGAAACAAGGAGTTTTT
TCACGATCTCCTAGATTTGATGGCACCCCCCAGTCAATTCTTACTGTCCAGGATGTAGAT
ACCCAAGTCAAACCTCCAGGGTTATGGTTGAATATCCAGCATGACTCCTTCTACAGCCAG
CACAATCTGAGTATGAGAAGCTTTGTTGTTTCCCTGTCTAGAAGTGTAATTATCAACTAT
ATTTCATCACCTGAGGTGAATTTCCTCCGAAGTATCGCAAGGCGATTCAATCCACGAGTG
ACAAAATTCGTTTTCCGGTTTCTCAGCGAGGATGAATTTGAGCCATCAACGAATCAAACA
TACAGTTCTTTGTTAAAGAATCTCACATTTGTTAAAACCTTCGCCTCAGGGATTCTTGTT
CCCAAACACTATATCTGGCCAGTGGACAACAGTTTGTACTTGCAGCCGCATACCTCAGTC
GTTTTGGATGCTCATAAGGAAGGTCTTGAGATTTTCGCAGCCGACTTTGCTAATGACGTA
CCTTCTGCTTATAATTATAGTTATGATCCTGTAGCTGAGTATTTATCCTATATTGACAAT
GGTAACTTCTCGGTGGACGGAGTGCTATCTGACTTCCCATCGACTCCATCTTCGTCAGTA
GATTGCTTCTCTCATTTGGGCAAGAATGATAAACCTCAAGTAAAGCTTCAGATTATTACG
TCTGAAGGAGCAAGTGGTGACTATCCTGGTTGCACTGATTTAGCATACACAAAGGCTGCT
TCCGATGGTGCAGATGTTCTCAACTGTCCTGTCCAAATGACTAAAGATGGAATACCTTTC
TGTCTTGGTTCGATAAATCTGATAGACAAGACCACTGCAGCCCAATCGCCATTCAGCAGC
ATTACTACCACTGTCCCTGAGCTTAAGATAACAAATGGAATACTCACTATCAACCTTACT
TGGACCGAGATTCAAAGCCTGAGACCGACAATATCAAACCGATGGTCAGTGTTTAGATTG
TTTCGGAATCCAAAGGCCAGAAATGACGGAAACTTTATGTCGTTAGCGGACTTCTTGACA
TTTGCCAAAAATACAACTTCTGTTTCTGGTGTGATGATCAGCATAGAGAATGCAGCATAC
CTGGCGAAGCAGGGATTAGGTGTAACTGGTGCTGTTTTGGACGCCTTAAGCAAATCTGGT
TACAATAATCAGACAGCTAAGAAAGTTTTGATCCAGTCAACTGACAGTTCTGTTCTGGAA
GAATTTAAGAAAAGTAGCTATGAACTTGTTTATGGGGTTGGGGATGATATCCGTGATATT
GAGAGCTCAACCATATTGGAGATCAAGACCTTTGCAAAATCTGTTATCATAACTAAGGAA
TCTGTCTTCCCCAGCGAGGATGCATTTATCATTGCACAAACGAATGTAGTGCAGAAGCTG
CAGTCATCAAATCTCACAGTATATGTACAACTCTTCAACAATGAGTTTGTGTCTCAAGCA
TGGGACTTTTTCTCAGATTCATCTCTTGAGTTAAACAACTATGCTGTTGGAGCTGGCATT
GATGGTGTTATTACAGAATACCCTGCCACAGCGGCTAGATACCGAAGGAACCGTTGTTTA
GGGTTAAAAGACTTGCCACCATATATGAGCCCTGTACAACCTGGGAGTCTCCTAGGACTC
ATTGCTCCTCAGTTTTTGCCACCAGCTGAAGCTCCCAACCCGGTACTCACTGAAAGTGAT
GTGGTTGAGCCACCTCTTCCACCTGTGGCAAAGATAAACCCATCTAATGCCAATGGGTCA
GCTATTGCTCCCACTCCTCCAAATGGCCAATCCTCCGTTGTTGCTAGCATTCTCATGAGC
TCTGTTGCAATTCTTCTTGCAACTATTATGGTAGTTTGA

Peptide Sequence

PEP ID

XP_016453729.1
PEP Infomation

PREDICTED: glycerophosphodiester phosphodiesterase GDPDL3-like [Nicotiana tabacum]
Sequence

MWNLRSISCLLLLCCSAAFVSAQRSNNATSKWFTLSGDAPKVIARGGFSGLMPDSSFNAY
TLASTISVADWVAWCDVQLTKDGVGICLSDIRLDNSSDVDVLFKNKQNTYLVNGVPQKGW
FSVDFNFKDLALVTLKQGVFSRSPRFDGTPQSILTVQDVDTQVKPPGLWLNIQHDSFYSQ
HNLSMRSFVVSLSRSVIINYISSPEVNFLRSIARRFNPRVTKFVFRFLSEDEFEPSTNQT
YSSLLKNLTFVKTFASGILVPKHYIWPVDNSLYLQPHTSVVLDAHKEGLEIFAADFANDV
PSAYNYSYDPVAEYLSYIDNGNFSVDGVLSDFPSTPSSSVDCFSHLGKNDKPQVKLQIIT
SEGASGDYPGCTDLAYTKAASDGADVLNCPVQMTKDGIPFCLGSINLIDKTTAAQSPFSS
ITTTVPELKITNGILTINLTWTEIQSLRPTISNRWSVFRLFRNPKARNDGNFMSLADFLT
FAKNTTSVSGVMISIENAAYLAKQGLGVTGAVLDALSKSGYNNQTAKKVLIQSTDSSVLE
EFKKSSYELVYGVGDDIRDIESSTILEIKTFAKSVIITKESVFPSEDAFIIAQTNVVQKL
QSSNLTVYVQLFNNEFVSQAWDFFSDSSLELNNYAVGAGIDGVITEYPATAARYRRNRCL
GLKDLPPYMSPVQPGSLLGLIAPQFLPPAEAPNPVLTESDVVEPPLPPVAKINPSNANGS
AIAPTPPNGQSSVVASILMSSVAILLATIMVV

Transcript Sequence

Gene sequence data has not been registered.